The Nobel Prize in Physiology for Medicine 2019
The Nobel Assembly at Karolinska Institutet
has today decided to award the 2019 Nobel Prize in Physiology for Medicine
jointly to William G. Kaelin Jr., Sir Peter J. Ratcliffe and Gregg L. Semenza
for their discoveries of how cells sense and adapt to oxygen availability.
SUMMARY
Animals need oxygen for the conversion of
food into useful energy. The fundamental importance of oxygen has been
understood for centuries, but how cells adapt to changes in levels of oxygen
has long been unknown.
William G. Kaelin Jr., Sir Peter J.
Ratcliffe and Gregg L. Semenza discovered how cells can sense and adapt to
changing oxygen availability. They identified molecular machinery that
regulates the activity of genes in response to varying levels of oxygen.
The seminal discoveries by this year’s
Nobel Laureates revealed the mechanism for one of life’s most essential
adaptive processes. They established the basis for our understanding of how
oxygen levels affect cellular metabolism and physiological function. Their
discoveries have also paved the way for promising new strategies to fight
anemia, cancer and many other diseases.
Oxygen
at center stage
Oxygen, with the formula O2, makes up about
one fifth of Earth’s atmosphere. Oxygen is essential for animal life: it is
used by the mitochondria present in virtually all animal cells in order to
convert food into useful energy. Otto Warburg, the recipient of the 1931 Nobel
Prize in Physiology or Medicine, revealed that this conversion is an enzymatic
process.
During evolution, mechanisms developed to
ensure a sufficient supply of oxygen to tissues and cells. The carotid body,
adjacent to large blood vessels on both sides of the neck, contains specialized
cells that sense the blood’s oxygen levels. The 1938 Nobel Prize in Physiology
or Medicine to Corneille Heymans awarded discoveries showing how blood oxygen
sensing via the carotid body controls our respiratory rate by communicating
directly with the brain.
HIF
enters the scene
In addition to the carotid body-controlled
rapid adaptation to low oxygen levels (hypoxia), there are other fundamental
physiological adaptations. A key physiological response to hypoxia is the rise
in levels of the hormone erythropoietin (EPO), which leads to increased
production of red blood cells (erythropoietin). The importance of hormonal
control of erythropoiesis was already known at the beginning of the 20th
century, but how this process was itself controlled by O2 remained a mystery.
Gregg Semenza studied the EPO gene and how
it is regulated by varying oxygen levels. By using gene-modified mice, specific
DNA segments located next to the EPO gene were shown to mediate the response to
hypoxia. Sir Peter Ratcliffe also studied O2-dependent regulation of the EPO
gene, and both research groups found that the oxygen sensing mechanism was
present in virtually all tissues, not only in the kidney cells where EPO is
normally produced. These were important findings showing that the mechanism was
general and functional in many different cell types.
Semenza wished to identify the cellular
components mediating this response. In cultured liver cells he discovered a
protein complex that binds to the identified DNA segment in an oxygen-dependent
manner. He called this complex the hypoxia-inducible factor (HIF) . Extensive
efforts to purify the HIF complex began, and in 1995, Semenza was able to
publish some of his key findings, including identification of the genes
encoding HIF. HIF was found to consist of two different DNA-binding proteins,
so called transcription factors, now named HIF-1α and ARNT. Now the researchers
could begin solving the puzzle, allowing them to understand which additional
components were involved and how the machinery works.
“Figure 1. When oxygen levels are low
(hypoxia), HIF-1α is protected from degradation and accumulates in the nucleus,
where it associates with ARNT and binds to specific DNA sequences (HRE) in
hypoxia-regulated genes (1). At normal oxygen levels, HIF-1α is rapidly
degraded by the proteasome (2). Oxygen regulates the degradation process by the
addition of hydroxyl groups (OH) to HIF-1α (3). The VHL protein can then
recognize and form a complex with HIF-1α leading to its degradation in an
oxygen-dependent manner (4).”
VHL:
an unexpected partner
When oxygen levels are high, cells contain
very little HIF-1α. However, when oxygen levels are low, the amount of HIF-1α
increases so that it can bind to and thus regulate the EPO gene as well as
other genes with HIF-binding DNA segments (Figure 1). Several research groups
showed that HIF-1α, which is normally rapidly degraded, is protected from
degradation in hypoxia. At normal oxygen levels, a cellular machine called the
proteasome, recognized by the 2004 Nobel Prize in Chemistry to Aaron
Ciechanover, Avram Hershko and Irwin Rose, degrades HIF-1α. Under such
conditions a small peptide, ubiquitin, is added to the HIF-1α protein.
Ubiquitin functions as a tag for proteins destined for degradation in the
proteasome. How ubiquitin binds to HIF-1α in an oxygen-dependent manner
remained a central question.
The answer came from an unexpected
direction. At about the same time as Semenza and Ratcliffe were exploring the
regulation of the EPO gene, cancer researcher William Kaelin, Jr. was
researching an inherited syndrome, von Hippel-Lindau’s disease (VHL disease).
This genetic disease leads to dramatically increased risk of certain cancers in
families with inherited VHL mutations. Kaelin showed that the VHL gene encodes
a protein that prevents the onset of cancer. Kaelin also showed that cancer
cells lacking a functional VHL gene express abnormally high levels of
hypoxia-regulated genes; but that when the VHL gene was reintroduced into
cancer cells, normal levels were restored. This was an important clue showing
that VHL was somehow involved in controlling responses to hypoxia. Additional
clues came from several research groups showing that VHL is part of a complex
that labels proteins with ubiquitin, marking them for degradation in the
proteasome. Ratcliffe and his research group then made a key discovery:
demonstrating that VHL can physically interact with HIF-1α and is required for
its degradation at normal oxygen levels. This conclusively linked VHL to
HIF-1α.
Oxygen
sHIFts the balance
Many pieces had fallen into place, but what
was still lacking was an understanding of how O2 levels regulate the
interaction between VHL and HIF-1α. The search focused on a specific portion of
the HIF-1α protein known to be important for VHL-dependent degradation, and both
Kaelin and Ratcliffe suspected that the key to O2-sensing resided somewhere in
this protein domain. In 2001, in two simultaneously published articles they
showed that under normal oxygen levels, hydroxyl groups are added at two
specific positions in HIF-1α (Figure 1). This protein modification, called
prolyl hydroxylation, allows VHL to recognize and bind to HIF-1α and thus
explained how normal oxygen levels control rapid HIF-1α degradation with the
help of oxygen-sensitive enzymes (so-called prolyl hydroxylases). Further
research by Ratcliffe and others identified the responsible prolyl
hydroxylases. It was also shown that the gene activating function of HIF-1α was
regulated by oxygen-dependent hydroxylation. The Nobel Laureates had now
elucidated the oxygen sensing mechanism and had shown how it works.
“Figure 2. The awarded mechanism for oxygen
sensing has fundamental importance in physiology, for example for our
metabolism, immune response and ability to adapt to exercise. Many pathological
processes are also affected. Intensive efforts are ongoing to develop new drugs
that can either inhibit or activate the oxygen-regulated machinery for
treatment of anemia, cancer and other diseases.”
Oxygen
shapes physiology and pathology
Thanks to the groundbreaking work of these
Nobel Laureates, we know much more about how different oxygen levels regulate
fundamental physiological processes. Oxygen sensing allows cells to adapt their
metabolism to low oxygen levels: for example, in our muscles during intense exercise.
Other examples of adaptive processes controlled by oxygen sensing include the
generation of new blood vessels and the production of red blood cells. Our
immune system and many other physiological functions are also fine-tuned by the
O2-sensing machinery. Oxygen sensing has even been shown to be essential during
fetal development for controlling normal blood vessel formation and placenta
development.
Oxygen sensing is central to a large number
of diseases (Figure 2). For example, patients with chronic renal failure often
suffer from severe anemia due to decreased EPO expression. EPO is produced by
cells in the kidney and is essential for controlling the formation of red blood
cells, as explained above. Moreover, the oxygen-regulated machinery has an important
role in cancer. In tumors, the oxygen-regulated machinery is utilized to
stimulate blood vessel formation and reshape metabolism for effective
proliferation of cancer cells. Intense ongoing efforts in academic laboratories
and pharmaceutical companies are now focused on developing drugs that can
interfere with different disease states by either activating, or blocking, the
oxygen-sensing machinery.
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